Insertion junction: CLIP2.043039_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043039
Chromosome:chromosome 3
Location:4282145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGTCCGGGCACAGCATGCAACTTCGCATCCCTTCCCTTGGGCTGGG
Internal bar code:TGCTTTTCCGCTCGTTATATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCGGACGTATGATGAGT
Suggested primer 2:CACCCAGCCTAAAGCCTCC