Insertion junction: CLIP2.043042_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043042
Chromosome:chromosome 2
Location:7038298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389838 (1 of 1) IPR000504//IPR002750//IPR012677 - RNA recognition motif domain // CobE/GbiG C-terminal domain // Nucleotide-binding alpha-beta plait domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGGCCATGCATCCAGCTATGGCTATGATTATATACGGTGCCTGGGCC
Internal bar code:CATGTCTGATAAATAGTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCTAGACTGCCTGCCT
Suggested primer 2:CTGTTTGCCGGCATTGGAAA