Insertion junction: CLIP2.043044_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043044
Chromosome:chromosome 12
Location:5465535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529850 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTGCTGATGGACCCCGAGGCACAACTCAGCAAGACCGTGACGACCG
Internal bar code:AAGATTCACGAACTTATACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACATAATGCGGCCACAGACA
Suggested primer 2:AAGGTGTTGGTGTGCAGGAA