Insertion junction: CLIP2.043046_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043046
Chromosome:chromosome 1
Location:1997250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010950 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGGGGCTGACGGAGCGGGTTGGCAGGGGGCTGTGGGGTAGGGGTGC
Internal bar code:ACGGCCGCTGGCAATCATAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCCTGCCCCTTTTTAT
Suggested primer 2:TGCGTTTTGGAAGTGCGAAG