Insertion junction: CLIP2.043048_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043048
Chromosome:chromosome 12
Location:3131674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500715 (1 of 5) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGCATACCGGTAGTGGTGTGTCAGCATGCTCCTCACCTTCGCCCGC
Internal bar code:TCTTAAATATACGCGAATAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCCAACAACAACCCACC
Suggested primer 2:AGGTTTTCGACTGGGTGGTG