Insertion junction: CLIP2.043054_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043054
Chromosome:chromosome 2
Location:4505535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106700 OPR4,RAP1 OctotricoPeptide Repeat protein 4; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGTACCTGTGGGGCGTGCAGGGTGGGCATGGCATTGCGGGCATGCA
Internal bar code:TACAGGAATTTATCCGGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGAAGGCTGTGTTTGTG
Suggested primer 2:GAATGAGCGACGTGAGGGAA