Insertion junction: CLIP2.043055_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043055
Chromosome:chromosome 6
Location:3835865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278178 (1 of 1) PF09495 - Protein of unknown function (DUF2462) (DUF2462) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGAATGGCCATCCTAGCAGCTACCACACTGGCAGCCGCGTCGGTTGA
Internal bar code:ATGACCATGTGATACACAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2431
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATCACATCGACACACA
Suggested primer 2:CGTCCTGGTAGGGCTTGTTT