Insertion junction: CLIP2.043058_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043058
Chromosome:chromosome 11
Location:2046691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467759 PIC1,PIC1-2 (1 of 2) PTHR34548:SF2 - PROTEIN TIC 21, CHLOROPLASTIC; Similar to AtTic21/PIC1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAACGTGGCGGCCACGGTGGGTGATGGGTGATGGCCTGGTGGGTGGGT
Internal bar code:TTTTTGGCTGCCTGGGGCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGAAGGTGGACAGGAA
Suggested primer 2:CCATCACAATGCAGCTACGC