Insertion junction: CLIP2.043064_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043064
Chromosome:chromosome 10
Location:4908811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453766 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGATGACCATGCTATCGAGGTTCTTGGCGAAGACCTTTGGGCGCGCCT
Internal bar code:ATGTGGGAGTCTGGTCGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3604
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGCTCCAACAATGCCA
Suggested primer 2:ATGTTGGTGGTAGAGGCACG