Insertion junction: CLIP2.043065_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043065
Chromosome:chromosome 4
Location:1456381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214000 (1 of 1) PTHR19331//PTHR27000 - LYSYL OXIDASE-RELATED // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTACTTCCAAGCAGACCTACCTGACTGCATCAGGTACCGACCACGGTG
Internal bar code:ACTCCCTGTCTTGATTGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2340
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACATTCACGCAAATGCA
Suggested primer 2:CCCTGCTGCGAATGAAATCG