Insertion junction: CLIP2.043070_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.043070
Chromosome:chromosome 9
Location:2242470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395000 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCGTATGCTCTCTTAACACACAGGTACACACAGATCGCAATTGTAA
Internal bar code:GGGGTGTTCTGCCACGTCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1573
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCATGCTCCTGATCCTC
Suggested primer 2:GTGAGCAGTTCGTTCTCCCA