Insertion junction: CLIP2.043073_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043073
Chromosome:chromosome 10
Location:5699945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459400 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGATGCTAGCGATGTTCATTGGGAGGCGCTACTTTAGTGGGAGGCGCT
Internal bar code:ATGTAGTACACAGTTTCGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2648
LEAP-Seq percent confirming:76.6667
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACCTGGGGCCTAAGGAG
Suggested primer 2:AACACATGGCGTAAGGGGAG