Insertion junction: CLIP2.043074_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043074
Chromosome:chromosome 6
Location:2671076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCCATCAGCCCTCACGTCCATACACCAGCCCTCACCAGCCCTCACG
Internal bar code:TATAAGAGTATTAAGTCGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:458
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAACTTCCCCACCCATC
Suggested primer 2:CCGTCACACACAACCGAGTA