Insertion junction: CLIP2.043074_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043074
Chromosome:chromosome 6
Location:2671079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270500 (1 of 1) PF00759//PF03067 - Glycosyl hydrolase family 9 (Glyco_hydro_9) // Chitin binding domain (Chitin_bind_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAGGTCTCGCAAAGGCCGCGGGTATTTATTGTCTTGCAGAAGAGGCA
Internal bar code:TATAAGAGTATTAAGTCGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCACACACAACCGAGTA
Suggested primer 2:CTCCAACTTCCCCACCCATC