Insertion junction: CLIP2.043083_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043083
Chromosome:chromosome 11
Location:624613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACTCCAACACGAACGCACCGCGTCAAGTTCGTCAAAGTAGTCGGGC
Internal bar code:GGGACACGGAGTGAGGTTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCCTACACACACACAC
Suggested primer 2:CACAAGAACCCAGCCCTCAT