Insertion junction: CLIP2.043086_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043086
Chromosome:chromosome 17
Location:4989738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735750 EFH11 EF-hand Calcium binding protein; (1 of 3) IPR000104//IPR002048 - Antifreeze protein, type I // EF-hand domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGGCGGCGGCCAGTCCGCCAGCCGTACATCGGCGTACGGCTGCAGG
Internal bar code:TCACATTTCTGGGATACGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAATTCACAGGGGAGGG
Suggested primer 2:TGGGAATGGAGCCAATCACC