Insertion junction: CLIP2.043087_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043087
Chromosome:chromosome 4
Location:1936964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218600 (1 of 13) IPR008942 - ENTH/VHS CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCGGCCCCACAATGGTCGGCCCGCCGGCGCCTCCGCCGCCTCCACC
Internal bar code:GTGGAAGGACTCGTCGTCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGATACAAGAGCGGAGG
Suggested primer 2:CCTGTCTTGTGCTGTTGTGC