Insertion junction: CLIP2.043094_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043094
Chromosome:chromosome 12
Location:3279144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499250 PDE10 (1 of 4) K13293 - cAMP-specific phosphodiesterase 4 (PDE4); 3'%252C5'-cyclic-nucleotide phosphodiesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGATGACGCTTCACGACTCGGTGCAGGCATGACGGCCGATCGGTGGA
Internal bar code:ATCATGCAGTACGACGTTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1922
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCACACTCGTGCAGGT
Suggested primer 2:AACTGTGCCCTGTCGTGTAG