Insertion junction: CLIP2.043106_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043106
Chromosome:chromosome 2
Location:266158
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074800 CYG9 (1 of 1) IPR000700//IPR001054//IPR029787 - PAS-associated, C-terminal // Adenylyl cyclase class-3/4/guanylyl cyclase // Nucleotide cyclase; Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTACTGGCCGGGTGAGTGCGCGAGCCGTGGTCCACGTGACGTGGCCG
Internal bar code:TAGAGCGTCAAGGTTCCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2172
LEAP-Seq percent confirming:59.1837
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTCGTACGGCACATCCA
Suggested primer 2:TCTGCAGTGCTCATCACCAG