Insertion junction: CLIP2.043108_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043108
Chromosome:chromosome 13
Location:79424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801505 (1 of 2) PTHR10642//PTHR10642:SF7 - RIBONUCLEASE H1 // SUBFAMILY NOT NAMED CDS
Cre13.g801506 (1 of 2) PTHR10642 - RIBONUCLEASE H1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGTTCGGTAGCCGCGCCTACCGCCGCCTCCGTCAGGTGTGCGGCGC
Internal bar code:ACGTTCTGAGCGGCCTAAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2150
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGAATGGGCCACAGCTG
Suggested primer 2:TTATCGCCTCCACCGAACAG