Insertion junction: CLIP2.043123_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043123
Chromosome:chromosome 4
Location:3679910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228925 intron
lncRNA_TCONS_00099769 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCCGTGCGTTCTCCCGCTCTCCTCGCAGGTCCGTCCTGGGCGGCG
Internal bar code:TAGGCAATGATGTTTACTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTTAAGGTGCTGAGGC
Suggested primer 2:CAGCAACACAACTGCCTTCC