Insertion junction: CLIP2.043127_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043127
Chromosome:chromosome 6
Location:3826208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278177 DNL6,LIG6 (1 of 1) PTHR10459:SF44 - ANKYRIN REPEAT-CONTAINING PROTEIN; DNA ligase 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGGGCGGGGTGGCGAGGTGGTGAGGTGGGTGGCATTTCATGGCAGAA
Internal bar code:TTAATTACGCGTTCAATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCACATGTGAAGCCACGGAT
Suggested primer 2:TCAGCCGAAACTGTGAGGAC