Insertion junction: CLIP2.043129_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043129
Chromosome:chromosome 12
Location:2190282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGCAGGAGCCTGTGGACTACACGCCGGTGATTGTGGGCCTGGTTGTG
Internal bar code:GAGCGGCGTATCCGATTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5745
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACGCCCGCTTAATAAAG
Suggested primer 2:CATGCTGTGTGAGGTGAGGT