Insertion junction: CLIP2.043129_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043129
Chromosome:chromosome 12
Location:2190283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGACAAGGGTTAGGTACGCCCAAAGGTTTGGTACCCGTCTTCCTG
Internal bar code:TTAGGAGTGAGCAGATCCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2458
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTGTGTGAGGTGAGGT
Suggested primer 2:GCCACGCCCGCTTAATAAAG