Insertion junction: CLIP2.043141_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043141
Chromosome:chromosome 6
Location:6804636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296150 (1 of 5) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1); PIF1-type helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCAATGTGCCGGGCTACGGCGCCTGCGTGCGCGTGCAGGTGCGCG
Internal bar code:CCTTTGGGGAGAGGCCCTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGGGCCGTGTACAACAT
Suggested primer 2:TCTTTGCGGTGGTCTCTCAC