Insertion junction: CLIP2.043147_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043147
Chromosome:chromosome 2
Location:5270205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGTGCGAGATCAGGTGAGAGACGTGGCGGCTGGGAGAAGGCATGTA
Internal bar code:CGGCAGATTGATGTGCCGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGAGCGTGGTCTATGC
Suggested primer 2:ATTGGAGTCAGCTACCCCCT