Insertion junction: CLIP2.043162_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043162
Chromosome:chromosome 9
Location:4086875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399178 CSN5 (1 of 1) K09613 - COP9 signalosome complex subunit 5 [EC:3.4.-.-] (COPS5, CSN5); COP signalosome subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCTTTGACGCCGATACAGGGTCGCGCTCGCTTGCCCTCGCTCTCGCC
Internal bar code:AACACCTCTTGCAGAAGAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACTGCACCCCTCACCAA
Suggested primer 2:ACACATCGACACAACCCTCC