Insertion junction: CLIP2.043169_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043169
Chromosome:chromosome 14
Location:2077465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621400 (1 of 1) IPR001810//IPR025886 - F-box domain // Phloem protein 2-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGCGGTGCGGTGCGGCGCAGTGCGGTGCGGCGCTGCACGTGCGGCC
Internal bar code:GGAAAGTCTGATGAGGTCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:12.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGGGCTATAGGTGGTGA
Suggested primer 2:AGACCACACCAACTGCAACA