Insertion junction: CLIP2.043171_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043171
Chromosome:chromosome 3
Location:6441694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCCCTCCATCTCCTCCAGCCGCGCCTTGACCTCCTCGATTTTCCG
Internal bar code:CATCCGGGTAAATCAGTTGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:4.28571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGACCGGTGCTAGGTTCA
Suggested primer 2:CCGTAGCTACTCGCGTACAG