Insertion junction: CLIP2.043179_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043179
Chromosome:chromosome 14
Location:3946930
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632847 ELG44 Exostosin-like glycosyltransferase 44; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCCAACTGGGGAGGGAGGGGACTGGGACAACCGGACATACCCTCCTC
Internal bar code:CCGCGATCGAATTACAAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:68
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCAGGGACAGGATAGA
Suggested primer 2:CGGGACCTGCTGTTCTTCTT