Insertion junction: CLIP2.043185_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043185
Chromosome:chromosome 6
Location:8643986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309951 (1 of 1) 3.2.1.18 - Exo-alpha-sialidase / Sialidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGGCTCAAAGATCTCAAACACCTCTGGCACCGTGTAGTTGACTTGC
Internal bar code:AATGGTTCAGACGTGTGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTCGCCCAACTAGCTCC
Suggested primer 2:CATAGTCATCGCCCCAGGAC