Insertion junction: CLIP2.043189_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043189
Chromosome:chromosome 14
Location:2467806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801638 (1 of 2) K04427 - mitogen-activated protein kinase kinase kinase 7 (MAP3K7, TAK1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTGTTACACGTGTCGGTTGTGCTCGTGTGTCCTTGCTGGGCATGGAT
Internal bar code:GTACGCTTGACGACTGCGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1286
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGGTTGACAAATGTGCG
Suggested primer 2:TGCACCTACAGACAGCCTTG