Insertion junction: CLIP2.043190_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043190
Chromosome:chromosome 2
Location:928745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079200 (1 of 1) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGTTTGCTTGCGGCCAACGAATGGTGGGCACATGCCATTCACACCGC
Internal bar code:GGCAAACGCGGAGTAGTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTAGCAAACTCACCTT
Suggested primer 2:GCCACAATGCAAGCATGACA