Insertion junction: CLIP2.043190_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043190
Chromosome:chromosome 2
Location:928749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079200 (1 of 1) PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGACATTCTTCTCGTTTTTTCCCTTCCCCACGTGGACCCTTTGCAGG
Internal bar code:GGCAAACGCGGAGTAGTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACAATGCAAGCATGACA
Suggested primer 2:GCCCCTAGCAAACTCACCTT