Insertion junction: CLIP2.043199_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043199
Chromosome:chromosome 7
Location:5212879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349100 HEL39 ATP-dependent RNA helicase; (1 of 1) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (DHX16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATATCCTGTATTGGTCGTCCTGGCTCCCGGTCCACTAGTCCCCTGAGG
Internal bar code:TCTTTCATTACCTAAGTAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCCAAGTACCTGTTCCA
Suggested primer 2:ACGTATGTGGTCACAAGCGT