Insertion junction: CLIP2.043201_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043201
Chromosome:chromosome 16
Location:6581134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674050 ADH12 Alcohol dehydrogenase; (1 of 1) 1.6.5.5 - NADPH:quinone reductase / Zeta-crystallin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAGCGACGAGAGGACGGGAGACGAGGCGGCGACAGCAGGTCGGCAAT
Internal bar code:TGTCAAACCTACGAATATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGACTGTGGCTGTGGTT
Suggested primer 2:TAAAACCCCGTGGCTCTGAC