Insertion junction: CLIP2.043202_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043202
Chromosome:chromosome 3
Location:1864450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154600 (1 of 2) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGAGGGCGGTAGCGGAAGCGGTAGCGGTGCGAGTGGGAGGAGGAAGG
Internal bar code:GGTGGGCATGAAAGTTTCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:536
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTTCCTCCGTGGTAA
Suggested primer 2:AAGCACAACCAATCCAACGC