Insertion junction: CLIP2.043204_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043204
Chromosome:chromosome 10
Location:3895221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446450 (1 of 1) PTHR26402:SF316 - TRANSCRIPTIONAL REGULATORY PROTEIN CUSR intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCGGCTCGGCTCAGGCCCCCAGCCCTCCCGCACAAAGCAGAACGCC
Internal bar code:CTCACCATGACGCTCATGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGACCATCCAGGCAGTAT
Suggested primer 2:CGAACGCACCAAAACTCGTT