Insertion junction: CLIP2.043210_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043210
Chromosome:chromosome 13
Location:2181005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578050 (1 of 3) IPR002828 - Survival protein SurE-like phosphatase/nucleotidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGAGGGTGCCGACTTGTGAGCTGAAGGCCAGGGTTGAATCCATGACG
Internal bar code:TGGGTTAGAAAGATTTGATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:373
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGAGGGGAAGTGAGGG
Suggested primer 2:CGGCCAAATCTGCAAATGGT