Insertion junction: CLIP2.043217_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043217
Chromosome:chromosome 17
Location:5613472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739900 (1 of 1) IPR012337//IPR027417 - Ribonuclease H-like domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAACAAGCGTGCTGACGTCCCTCCTTGCTGCTGGTCGGCTCCCCCTG
Internal bar code:GTTTTAGCTTCCTCGTGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3437
LEAP-Seq percent confirming:92.381
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATATCACACAGCAGGCG
Suggested primer 2:TCGTGTCACAGGTGCAATCA