Insertion junction: CLIP2.043220_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043220
Chromosome:chromosome 3
Location:1954388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155350 PPO4 Pyridoxamine 5'-phosphate oxidase-like protein; (1 of 1) 1.14.13.142 - 3-ketosteroid 9-alpha-monooxygenase / 3-ketosteroid 9-alpha-hydroxylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGGGTGGGAGTTCAGGGCTTTATCGCTTTACTTGATGCGCCTGCCCT
Internal bar code:GTGAAATCAGCGCTGATTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGATCATGCGGTCCGG
Suggested primer 2:TGTGACCCACTTCATCCACG