Insertion junction: CLIP2.043231_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043231
Chromosome:chromosome 1
Location:2044097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011250 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCACGCTGCAACCCCCCCCCCCCCCCACACACACACACACCAGGCCAA
Internal bar code:TGGACGTTCGACAGGCAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1056
LEAP-Seq percent confirming:48.4848
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGAATGAAAAGCTCCGCT
Suggested primer 2:GTTTGTGTTTGGGATGGGGC