Insertion junction: CLIP2.043231_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.043231
Chromosome:chromosome 1
Location:2044100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g011250 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTGCCAGGTAGAGGATATGGGTAAGGGATTGAGGTGCGAGTGTTTGC
Internal bar code:TGGACGTTCGACAGGCAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTGTTTGGGATGGGGC
Suggested primer 2:TCCGAATGAAAAGCTCCGCT