Insertion junction: CLIP2.043244_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.043244
Chromosome:chromosome 9
Location:3602306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396772 Similar to Gametolysin and Autolysin; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACTCGCGCCGTTGCGTACGCACGCTGGCTACCTCTGCCAACCCTG
Internal bar code:GATACCCGATAAGGGGTATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2058
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAAGAGCGTCATTCTGT
Suggested primer 2:GTGCCCATATCGGAGGAGTG