Insertion junction: CLIP2.043248_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043248
Chromosome:chromosome 4
Location:1825380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217850 (1 of 3) IPR000104//IPR003439//IPR003593//IPR013525//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATACTCGTTTCAGTTGCACACGTACCCACTACTGGGCCGGGGGGGAGG
Internal bar code:CTTGTGGCAGGACGTCTAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:259
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTAAGTATGGTCTCGGC
Suggested primer 2:AAAAGCGGTACAGAGGGTGG