Insertion junction: CLIP2.043267_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043267
Chromosome:chromosome 14
Location:1294555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616450 CYG46 (1 of 2) PF00211//PF03924 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // CHASE domain (CHASE); Adenylate/guanylate cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTCGCTCGTTGGTATTACTCGCAGGGTAAGAACTTCTCGGAGGAGTT
Internal bar code:GCTGGGGGGCGGGGCGGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAAACCCCAAGCGTACC
Suggested primer 2:CCCAAACATGTAGGGCCCAT