Insertion junction: CLIP2.043290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.043290
Chromosome:chromosome 13
Location:2613406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580950 GT90-25,GT90F25 (1 of 11) 2.4.2.26 - Protein xylosyltransferase / Uridine diphosphoxylose-protein xylosyltransferase; GT90 family protein 25 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGCATGTGTGACTATGTGTGTGTTCGGAAAGCAAATACCGGTA
Internal bar code:TTAGGTGCCTTTGTTCTGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGAGCGTGTGGACACT
Suggested primer 2:AGTCTTCGCAAATGACCCGT