Insertion junction: CLIP2.043296_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.043296
Chromosome:chromosome 2
Location:5034794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATACACCCATCGCTACCCCCTGACCCCTGAACAACTGGATCGGCCCCA
Internal bar code:GTCCGGCGTTGGGTATCGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:22.5806
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTCCTATCGGACGTGAG
Suggested primer 2:GCTGCCCACTGGATACTTGT