Insertion junction: CLIP2.043298_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.043298
Chromosome:chromosome 3
Location:5363052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183350 SRH7 SNF2-related DNA/RNA helicase; (1 of 1) PTHR10799//PTHR10799:SF654 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCAGCACGCCGCGCCCGGCGGCGCCGCCGCCGTAGCCGCCGCCGCCG
Internal bar code:TCTGGAATCGTGATCAGAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1739
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTCAGCGTCAACAGCAT
Suggested primer 2:AAAAGGAAACGAAAGCCCGC