Insertion junction: CLIP2.043300_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.043300
Chromosome:chromosome 17
Location:1813114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709150 HTB30,HTB3,HTB28 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCACCTTCTCAAAGATGTCGTTGATGAAGCTGTTCATGATGGACATG
Internal bar code:GCGGCTTTTTTGACAATCTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3173
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGTCAAACAACCGCTC
Suggested primer 2:ACACAGATGAATGCGGCAGA